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Binary point-cloud data for part of the submerged environs of Saint Croix and Saint Thomas, U.S. Virgin Islands, were produced from remotely sensed, geographically referenced elevation measurements by the U.S. Geological Survey in collaboration with the National Oceanic and Atmospheric Administration's Coral Reef Conservation Program. Elevation measurements were collected over the area using the second-generation Experimental Advanced Airborne Research Lidar, a pulsed laser ranging system mounted onboard an aircraft to measure ground elevation, vegetation canopy, and coastal topography. The system uses high-frequency laser beams directed at the Earth's surface through an opening in the bottom of the aircraft's fuselage. The laser system records the time difference between emission of the laser beam and the reception of the reflected laser signal in the aircraft. The plane travels over the target area at approximately 55 meters per second at an elevation of approximately 300 meters, resulting in a laser swath of approximately 240 meters with an average point spacing of 0.5-1.6 meters. The nominal vertical elevation accuracy expressed as the root mean square error (RMSE) is 13.5 centimeters on Saint Croix. Data were insufficient to calculate the nominal vertical elevation accuracy expressed as the root mean square error (RMSE) on Saint Thomas. A peak sampling rate of 15-30 kilohertz results in an extremely dense spatial elevation dataset. More than 100 kilometers of coastline can be surveyed easily within a 3- to 4-hour mission. When resultant elevation maps for an area are analyzed, they provide a useful tool to make management decisions regarding land development.